# Sample originally from https://github.com/broadinstitute/centaur ## # Check that we can: # - Create a file from a task and feed it into subsequent commands. # - Create a file output by interpolating a file name # - Use engine functions on an interpolated file name ## task mkFile { command { echo "small file contents" > out.txt } output { File out = "out.txt" } runtime { docker: "ubuntu:latest" } } task consumeFile { File in_file String out_name command { cat ${in_file} > ${out_name} } runtime { docker: "ubuntu:latest" } output { File out_interpolation = "${out_name}" String contents = read_string("${out_name}") String contentsAlt = read_string(out_interpolation) } } workflow filepassing { call mkFile call consumeFile {input: in_file=mkFile.out, out_name = "myFileName.abc.txt" } output { consumeFile.contents consumeFile.contentsAlt } }