Merge pull request #1254 from github/cut-release-v2.11.4

v2.11.4 release

README.md

@@ -143,8 +143,8 @@ If you are the current maintainer of this gem:
  0. Make sure your local dependencies are up to date: `bundle install`
  0. Ensure that samples are updated: `bundle exec rake samples`
  0. Ensure that tests are green: `bundle exec rake test`
- 0. Bump gem version in github-linguist.gemspec.  For example, [like this](https://github.com/github/linguist/commit/97908204a385940e47251af9ecb689e8f6515c48).
- 0. Make a PR to github/linguist.  For example, [#1075](https://github.com/github/linguist/pull/1075).
+ 0. Bump gem version in `lib/linguist/version.rb`.  For example, [like this](https://github.com/github/linguist/commit/8d2ea90a5ba3b2fe6e1508b7155aa4632eea2985).
+ 0. Make a PR to github/linguist.  For example, [#1238](https://github.com/github/linguist/pull/1238).
  0. Build a local gem: `gem build github-linguist.gemspec`
  0. Testing:
    0. Bump the Gemfile and Gemfile.lock versions for an app which relies on this gem

github-linguist.gemspec

@@ -13,7 +13,7 @@ Gem::Specification.new do |s|
   s.files = Dir['lib/**/*']
   s.executables << 'linguist'
 
-  s.add_dependency 'charlock_holmes', '~> 0.7.1'
+  s.add_dependency 'charlock_holmes', '~> 0.7.2'
   s.add_dependency 'escape_utils',    '~> 1.0.1'
   s.add_dependency 'mime-types',      '~> 1.19'
   s.add_dependency 'pygments.rb',     '~> 0.5.4'

lib/linguist/blob_helper.rb

@@ -112,6 +112,12 @@ module Linguist
       end
     end
 
+    def ruby_encoding
+      if hash = detect_encoding
+        hash[:ruby_encoding]
+      end
+    end
+
     # Try to guess the encoding
     #
     # Returns: a Hash, with :encoding, :confidence, :type
@@ -256,10 +262,16 @@ module Linguist
           # without changing the encoding of `data`, and
           # also--importantly--without having to duplicate many (potentially
           # large) strings.
-          encoded_newlines = ["\r\n", "\r", "\n"].
-            map { |nl| nl.encode(encoding).force_encoding(data.encoding) }
+          begin
+            encoded_newlines = ["\r\n", "\r", "\n"].
+              map { |nl| nl.encode(ruby_encoding, "ASCII-8BIT").force_encoding(data.encoding) }
 
-          data.split(Regexp.union(encoded_newlines), -1)
+            data.split(Regexp.union(encoded_newlines), -1)
+          rescue Encoding::ConverterNotFoundError
+            # The data is not splittable in the detected encoding.  Assume it's
+            # one big line.
+            [data]
+          end
         else
           []
         end

lib/linguist/languages.yml

@@ -293,6 +293,7 @@ C++:
   - .inl
   - .tcc
   - .tpp
+  - .ipp
 
 C-ObjDump:
   type: data
@@ -429,6 +430,14 @@ Common Lisp:
   - clisp
   - ecl
 
+Component Pascal:
+  type: programming
+  lexer: Delphi
+  color: "#b0ce4e"
+  extensions:
+  - .cp
+  - .cps
+
 Coq:
   type: programming
   extensions:
@@ -705,6 +714,12 @@ Game Maker Language:
   extensions:
   - .gml
 
+GAMS:
+  type: programming
+  lexer: Text only
+  extensions:
+  - .gms
+
 GAP:
   type: programming
   lexer: Text only
@@ -819,6 +834,9 @@ Groovy:
   color: "#e69f56"
   extensions:
   - .groovy
+  - .grt
+  - .gtpl
+  - .gvy
   interpreters:
   - groovy
 
@@ -907,7 +925,7 @@ Haskell:
 Haxe:
   type: programming
   ace_mode: haxe
-  color: "#346d51"
+  color: "#f7941e"
   extensions:
   - .hx
   - .hxsl
@@ -1059,6 +1077,7 @@ JavaScript:
   - ._js
   - .bones
   - .es6
+  - .frag
   - .jake
   - .jsfl
   - .jsm
@@ -1250,6 +1269,7 @@ Markdown:
   - .md
   - .markdown
   - .mkd
+  - .mkdn
   - .mkdown
   - .ron
 
@@ -1471,6 +1491,14 @@ Org:
   extensions:
   - .org
 
+Ox:
+  type: programming
+  lexer: Text only
+  extensions:
+  - .ox
+  - .oxh
+  - .oxo
+
 Oxygene:
   type: programming
   lexer: Text only
@@ -1500,6 +1528,13 @@ PHP:
   filenames:
   - Phakefile
 
+Pan:
+  type: programming
+  lexer: Text only
+  color: '#cc0000'
+  extensions:
+  - .pan
+
 Parrot:
   type: programming
   color: "#f3ca0a"
@@ -1698,6 +1733,8 @@ R:
   extensions:
   - .r
   - .R
+  - .Rd
+  - .rd
   - .rsx
   filenames:
   - .Rprofile
@@ -1779,7 +1816,7 @@ Red:
   extensions:
   - .red
   - .reds
-  
+
 Redcode:
   extensions:
   - .cw
@@ -1842,6 +1879,13 @@ Rust:
   extensions:
   - .rs
 
+SAS:
+  type: programming
+  color: "#1E90FF"
+  lexer: Text only
+  extensions:
+  - .sas
+
 SCSS:
   type: markup
   group: CSS
@@ -1850,7 +1894,7 @@ SCSS:
   - .scss
 
 SQL:
-  type: programming
+  type: data
   ace_mode: sql
   extensions:
   - .sql
@@ -1981,8 +2025,9 @@ Standard ML:
   aliases:
   - sml
   extensions:
-  - .sml
+  - .ML
   - .fun
+  - .sml
 
 Stata:
   type: programming
@@ -2010,6 +2055,13 @@ SuperCollider:
   extensions:
   - .scd
 
+Swift:
+  type: programming
+  color: "#ffac45"
+  lexer: Text only
+  extensions:
+  - .swift
+
 SystemVerilog:
   type: programming
   color: "#343761"
@@ -2200,6 +2252,7 @@ XML:
   - .clixml
   - .cproject
   - .csproj
+  - .ct
   - .dita
   - .ditamap
   - .ditaval
@@ -2305,6 +2358,14 @@ Zephir:
   extensions:
   - .zep
 
+Zimpl:
+  type: programming
+  lexer: Text only
+  extensions:
+  - .zimpl
+  - .zmpl
+  - .zpl
+
 eC:
   type: programming
   search_term: ec

lib/linguist/vendor.yml

@@ -148,7 +148,7 @@
 - (^|/)[Mm]icrosoft([Mm]vc)?([Aa]jax|[Vv]alidation)(\.debug)?\.js$
 
 # NuGet
-- ^[Pp]ackages/
+- ^[Pp]ackages\/.+\.\d+\/
 
 # ExtJS
 - (^|/)extjs/.*?\.js$
@@ -168,6 +168,9 @@
 - (^|/)extjs/src/
 - (^|/)extjs/welcome/
 
+# Html5shiv
+- (^|/)html5shiv(\.min)?\.js$
+
 # Samples folders
 - ^[Ss]amples/
 

lib/linguist/version.rb

@@ -1,3 +1,3 @@
 module Linguist
-  VERSION = "2.11.1"
+  VERSION = "2.11.4"
 end

samples/C++/epoll_reactor.ipp

@@ -0,0 +1,664 @@
+//
+// detail/impl/epoll_reactor.ipp
+// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+//
+// Copyright (c) 2003-2013 Christopher M. Kohlhoff (chris at kohlhoff dot com)
+//
+// Distributed under the Boost Software License, Version 1.0. (See accompanying
+// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
+//
+
+#ifndef BOOST_ASIO_DETAIL_IMPL_EPOLL_REACTOR_IPP
+#define BOOST_ASIO_DETAIL_IMPL_EPOLL_REACTOR_IPP
+
+#if defined(_MSC_VER) && (_MSC_VER >= 1200)
+# pragma once
+#endif // defined(_MSC_VER) && (_MSC_VER >= 1200)
+
+#include <boost/asio/detail/config.hpp>
+
+#if defined(BOOST_ASIO_HAS_EPOLL)
+
+#include <cstddef>
+#include <sys/epoll.h>
+#include <boost/asio/detail/epoll_reactor.hpp>
+#include <boost/asio/detail/throw_error.hpp>
+#include <boost/asio/error.hpp>
+
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+# include <sys/timerfd.h>
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+
+#include <boost/asio/detail/push_options.hpp>
+
+namespace boost {
+namespace asio {
+namespace detail {
+
+epoll_reactor::epoll_reactor(boost::asio::io_service& io_service)
+  : boost::asio::detail::service_base<epoll_reactor>(io_service),
+    io_service_(use_service<io_service_impl>(io_service)),
+    mutex_(),
+    interrupter_(),
+    epoll_fd_(do_epoll_create()),
+    timer_fd_(do_timerfd_create()),
+    shutdown_(false)
+{
+  // Add the interrupter's descriptor to epoll.
+  epoll_event ev = { 0, { 0 } };
+  ev.events = EPOLLIN | EPOLLERR | EPOLLET;
+  ev.data.ptr = &interrupter_;
+  epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, interrupter_.read_descriptor(), &ev);
+  interrupter_.interrupt();
+
+  // Add the timer descriptor to epoll.
+  if (timer_fd_ != -1)
+  {
+    ev.events = EPOLLIN | EPOLLERR;
+    ev.data.ptr = &timer_fd_;
+    epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, timer_fd_, &ev);
+  }
+}
+
+epoll_reactor::~epoll_reactor()
+{
+  if (epoll_fd_ != -1)
+    close(epoll_fd_);
+  if (timer_fd_ != -1)
+    close(timer_fd_);
+}
+
+void epoll_reactor::shutdown_service()
+{
+  mutex::scoped_lock lock(mutex_);
+  shutdown_ = true;
+  lock.unlock();
+
+  op_queue<operation> ops;
+
+  while (descriptor_state* state = registered_descriptors_.first())
+  {
+    for (int i = 0; i < max_ops; ++i)
+      ops.push(state->op_queue_[i]);
+    state->shutdown_ = true;
+    registered_descriptors_.free(state);
+  }
+
+  timer_queues_.get_all_timers(ops);
+
+  io_service_.abandon_operations(ops);
+}
+
+void epoll_reactor::fork_service(boost::asio::io_service::fork_event fork_ev)
+{
+  if (fork_ev == boost::asio::io_service::fork_child)
+  {
+    if (epoll_fd_ != -1)
+      ::close(epoll_fd_);
+    epoll_fd_ = -1;
+    epoll_fd_ = do_epoll_create();
+
+    if (timer_fd_ != -1)
+      ::close(timer_fd_);
+    timer_fd_ = -1;
+    timer_fd_ = do_timerfd_create();
+
+    interrupter_.recreate();
+
+    // Add the interrupter's descriptor to epoll.
+    epoll_event ev = { 0, { 0 } };
+    ev.events = EPOLLIN | EPOLLERR | EPOLLET;
+    ev.data.ptr = &interrupter_;
+    epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, interrupter_.read_descriptor(), &ev);
+    interrupter_.interrupt();
+
+    // Add the timer descriptor to epoll.
+    if (timer_fd_ != -1)
+    {
+      ev.events = EPOLLIN | EPOLLERR;
+      ev.data.ptr = &timer_fd_;
+      epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, timer_fd_, &ev);
+    }
+
+    update_timeout();
+
+    // Re-register all descriptors with epoll.
+    mutex::scoped_lock descriptors_lock(registered_descriptors_mutex_);
+    for (descriptor_state* state = registered_descriptors_.first();
+        state != 0; state = state->next_)
+    {
+      ev.events = state->registered_events_;
+      ev.data.ptr = state;
+      int result = epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, state->descriptor_, &ev);
+      if (result != 0)
+      {
+        boost::system::error_code ec(errno,
+            boost::asio::error::get_system_category());
+        boost::asio::detail::throw_error(ec, "epoll re-registration");
+      }
+    }
+  }
+}
+
+void epoll_reactor::init_task()
+{
+  io_service_.init_task();
+}
+
+int epoll_reactor::register_descriptor(socket_type descriptor,
+    epoll_reactor::per_descriptor_data& descriptor_data)
+{
+  descriptor_data = allocate_descriptor_state();
+
+  {
+    mutex::scoped_lock descriptor_lock(descriptor_data->mutex_);
+
+    descriptor_data->reactor_ = this;
+    descriptor_data->descriptor_ = descriptor;
+    descriptor_data->shutdown_ = false;
+  }
+
+  epoll_event ev = { 0, { 0 } };
+  ev.events = EPOLLIN | EPOLLERR | EPOLLHUP | EPOLLPRI | EPOLLET;
+  descriptor_data->registered_events_ = ev.events;
+  ev.data.ptr = descriptor_data;
+  int result = epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, descriptor, &ev);
+  if (result != 0)
+    return errno;
+
+  return 0;
+}
+
+int epoll_reactor::register_internal_descriptor(
+    int op_type, socket_type descriptor,
+    epoll_reactor::per_descriptor_data& descriptor_data, reactor_op* op)
+{
+  descriptor_data = allocate_descriptor_state();
+
+  {
+    mutex::scoped_lock descriptor_lock(descriptor_data->mutex_);
+
+    descriptor_data->reactor_ = this;
+    descriptor_data->descriptor_ = descriptor;
+    descriptor_data->shutdown_ = false;
+    descriptor_data->op_queue_[op_type].push(op);
+  }
+
+  epoll_event ev = { 0, { 0 } };
+  ev.events = EPOLLIN | EPOLLERR | EPOLLHUP | EPOLLPRI | EPOLLET;
+  descriptor_data->registered_events_ = ev.events;
+  ev.data.ptr = descriptor_data;
+  int result = epoll_ctl(epoll_fd_, EPOLL_CTL_ADD, descriptor, &ev);
+  if (result != 0)
+    return errno;
+
+  return 0;
+}
+
+void epoll_reactor::move_descriptor(socket_type,
+    epoll_reactor::per_descriptor_data& target_descriptor_data,
+    epoll_reactor::per_descriptor_data& source_descriptor_data)
+{
+  target_descriptor_data = source_descriptor_data;
+  source_descriptor_data = 0;
+}
+
+void epoll_reactor::start_op(int op_type, socket_type descriptor,
+    epoll_reactor::per_descriptor_data& descriptor_data, reactor_op* op,
+    bool is_continuation, bool allow_speculative)
+{
+  if (!descriptor_data)
+  {
+    op->ec_ = boost::asio::error::bad_descriptor;
+    post_immediate_completion(op, is_continuation);
+    return;
+  }
+
+  mutex::scoped_lock descriptor_lock(descriptor_data->mutex_);
+
+  if (descriptor_data->shutdown_)
+  {
+    post_immediate_completion(op, is_continuation);
+    return;
+  }
+
+  if (descriptor_data->op_queue_[op_type].empty())
+  {
+    if (allow_speculative
+        && (op_type != read_op
+          || descriptor_data->op_queue_[except_op].empty()))
+    {
+      if (op->perform())
+      {
+        descriptor_lock.unlock();
+        io_service_.post_immediate_completion(op, is_continuation);
+        return;
+      }
+
+      if (op_type == write_op)
+      {
+        if ((descriptor_data->registered_events_ & EPOLLOUT) == 0)
+        {
+          epoll_event ev = { 0, { 0 } };
+          ev.events = descriptor_data->registered_events_ | EPOLLOUT;
+          ev.data.ptr = descriptor_data;
+          if (epoll_ctl(epoll_fd_, EPOLL_CTL_MOD, descriptor, &ev) == 0)
+          {
+            descriptor_data->registered_events_ |= ev.events;
+          }
+          else
+          {
+            op->ec_ = boost::system::error_code(errno,
+                boost::asio::error::get_system_category());
+            io_service_.post_immediate_completion(op, is_continuation);
+            return;
+          }
+        }
+      }
+    }
+    else
+    {
+      if (op_type == write_op)
+      {
+        descriptor_data->registered_events_ |= EPOLLOUT;
+      }
+
+      epoll_event ev = { 0, { 0 } };
+      ev.events = descriptor_data->registered_events_;
+      ev.data.ptr = descriptor_data;
+      epoll_ctl(epoll_fd_, EPOLL_CTL_MOD, descriptor, &ev);
+    }
+  }
+
+  descriptor_data->op_queue_[op_type].push(op);
+  io_service_.work_started();
+}
+
+void epoll_reactor::cancel_ops(socket_type,
+    epoll_reactor::per_descriptor_data& descriptor_data)
+{
+  if (!descriptor_data)
+    return;
+
+  mutex::scoped_lock descriptor_lock(descriptor_data->mutex_);
+
+  op_queue<operation> ops;
+  for (int i = 0; i < max_ops; ++i)
+  {
+    while (reactor_op* op = descriptor_data->op_queue_[i].front())
+    {
+      op->ec_ = boost::asio::error::operation_aborted;
+      descriptor_data->op_queue_[i].pop();
+      ops.push(op);
+    }
+  }
+
+  descriptor_lock.unlock();
+
+  io_service_.post_deferred_completions(ops);
+}
+
+void epoll_reactor::deregister_descriptor(socket_type descriptor,
+    epoll_reactor::per_descriptor_data& descriptor_data, bool closing)
+{
+  if (!descriptor_data)
+    return;
+
+  mutex::scoped_lock descriptor_lock(descriptor_data->mutex_);
+
+  if (!descriptor_data->shutdown_)
+  {
+    if (closing)
+    {
+      // The descriptor will be automatically removed from the epoll set when
+      // it is closed.
+    }
+    else
+    {
+      epoll_event ev = { 0, { 0 } };
+      epoll_ctl(epoll_fd_, EPOLL_CTL_DEL, descriptor, &ev);
+    }
+
+    op_queue<operation> ops;
+    for (int i = 0; i < max_ops; ++i)
+    {
+      while (reactor_op* op = descriptor_data->op_queue_[i].front())
+      {
+        op->ec_ = boost::asio::error::operation_aborted;
+        descriptor_data->op_queue_[i].pop();
+        ops.push(op);
+      }
+    }
+
+    descriptor_data->descriptor_ = -1;
+    descriptor_data->shutdown_ = true;
+
+    descriptor_lock.unlock();
+
+    free_descriptor_state(descriptor_data);
+    descriptor_data = 0;
+
+    io_service_.post_deferred_completions(ops);
+  }
+}
+
+void epoll_reactor::deregister_internal_descriptor(socket_type descriptor,
+    epoll_reactor::per_descriptor_data& descriptor_data)
+{
+  if (!descriptor_data)
+    return;
+
+  mutex::scoped_lock descriptor_lock(descriptor_data->mutex_);
+
+  if (!descriptor_data->shutdown_)
+  {
+    epoll_event ev = { 0, { 0 } };
+    epoll_ctl(epoll_fd_, EPOLL_CTL_DEL, descriptor, &ev);
+
+    op_queue<operation> ops;
+    for (int i = 0; i < max_ops; ++i)
+      ops.push(descriptor_data->op_queue_[i]);
+
+    descriptor_data->descriptor_ = -1;
+    descriptor_data->shutdown_ = true;
+
+    descriptor_lock.unlock();
+
+    free_descriptor_state(descriptor_data);
+    descriptor_data = 0;
+  }
+}
+
+void epoll_reactor::run(bool block, op_queue<operation>& ops)
+{
+  // This code relies on the fact that the task_io_service queues the reactor
+  // task behind all descriptor operations generated by this function. This
+  // means, that by the time we reach this point, any previously returned
+  // descriptor operations have already been dequeued. Therefore it is now safe
+  // for us to reuse and return them for the task_io_service to queue again.
+
+  // Calculate a timeout only if timerfd is not used.
+  int timeout;
+  if (timer_fd_ != -1)
+    timeout = block ? -1 : 0;
+  else
+  {
+    mutex::scoped_lock lock(mutex_);
+    timeout = block ? get_timeout() : 0;
+  }
+
+  // Block on the epoll descriptor.
+  epoll_event events[128];
+  int num_events = epoll_wait(epoll_fd_, events, 128, timeout);
+
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+  bool check_timers = (timer_fd_ == -1);
+#else // defined(BOOST_ASIO_HAS_TIMERFD)
+  bool check_timers = true;
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+
+  // Dispatch the waiting events.
+  for (int i = 0; i < num_events; ++i)
+  {
+    void* ptr = events[i].data.ptr;
+    if (ptr == &interrupter_)
+    {
+      // No need to reset the interrupter since we're leaving the descriptor
+      // in a ready-to-read state and relying on edge-triggered notifications
+      // to make it so that we only get woken up when the descriptor's epoll
+      // registration is updated.
+
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+      if (timer_fd_ == -1)
+        check_timers = true;
+#else // defined(BOOST_ASIO_HAS_TIMERFD)
+      check_timers = true;
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+    }
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+    else if (ptr == &timer_fd_)
+    {
+      check_timers = true;
+    }
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+    else
+    {
+      // The descriptor operation doesn't count as work in and of itself, so we
+      // don't call work_started() here. This still allows the io_service to
+      // stop if the only remaining operations are descriptor operations.
+      descriptor_state* descriptor_data = static_cast<descriptor_state*>(ptr);
+      descriptor_data->set_ready_events(events[i].events);
+      ops.push(descriptor_data);
+    }
+  }
+
+  if (check_timers)
+  {
+    mutex::scoped_lock common_lock(mutex_);
+    timer_queues_.get_ready_timers(ops);
+
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+    if (timer_fd_ != -1)
+    {
+      itimerspec new_timeout;
+      itimerspec old_timeout;
+      int flags = get_timeout(new_timeout);
+      timerfd_settime(timer_fd_, flags, &new_timeout, &old_timeout);
+    }
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+  }
+}
+
+void epoll_reactor::interrupt()
+{
+  epoll_event ev = { 0, { 0 } };
+  ev.events = EPOLLIN | EPOLLERR | EPOLLET;
+  ev.data.ptr = &interrupter_;
+  epoll_ctl(epoll_fd_, EPOLL_CTL_MOD, interrupter_.read_descriptor(), &ev);
+}
+
+int epoll_reactor::do_epoll_create()
+{
+#if defined(EPOLL_CLOEXEC)
+  int fd = epoll_create1(EPOLL_CLOEXEC);
+#else // defined(EPOLL_CLOEXEC)
+  int fd = -1;
+  errno = EINVAL;
+#endif // defined(EPOLL_CLOEXEC)
+
+  if (fd == -1 && (errno == EINVAL || errno == ENOSYS))
+  {
+    fd = epoll_create(epoll_size);
+    if (fd != -1)
+      ::fcntl(fd, F_SETFD, FD_CLOEXEC);
+  }
+
+  if (fd == -1)
+  {
+    boost::system::error_code ec(errno,
+        boost::asio::error::get_system_category());
+    boost::asio::detail::throw_error(ec, "epoll");
+  }
+
+  return fd;
+}
+
+int epoll_reactor::do_timerfd_create()
+{
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+# if defined(TFD_CLOEXEC)
+  int fd = timerfd_create(CLOCK_MONOTONIC, TFD_CLOEXEC);
+# else // defined(TFD_CLOEXEC)
+  int fd = -1;
+  errno = EINVAL;
+# endif // defined(TFD_CLOEXEC)
+
+  if (fd == -1 && errno == EINVAL)
+  {
+    fd = timerfd_create(CLOCK_MONOTONIC, 0);
+    if (fd != -1)
+      ::fcntl(fd, F_SETFD, FD_CLOEXEC);
+  }
+
+  return fd;
+#else // defined(BOOST_ASIO_HAS_TIMERFD)
+  return -1;
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+}
+
+epoll_reactor::descriptor_state* epoll_reactor::allocate_descriptor_state()
+{
+  mutex::scoped_lock descriptors_lock(registered_descriptors_mutex_);
+  return registered_descriptors_.alloc();
+}
+
+void epoll_reactor::free_descriptor_state(epoll_reactor::descriptor_state* s)
+{
+  mutex::scoped_lock descriptors_lock(registered_descriptors_mutex_);
+  registered_descriptors_.free(s);
+}
+
+void epoll_reactor::do_add_timer_queue(timer_queue_base& queue)
+{
+  mutex::scoped_lock lock(mutex_);
+  timer_queues_.insert(&queue);
+}
+
+void epoll_reactor::do_remove_timer_queue(timer_queue_base& queue)
+{
+  mutex::scoped_lock lock(mutex_);
+  timer_queues_.erase(&queue);
+}
+
+void epoll_reactor::update_timeout()
+{
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+  if (timer_fd_ != -1)
+  {
+    itimerspec new_timeout;
+    itimerspec old_timeout;
+    int flags = get_timeout(new_timeout);
+    timerfd_settime(timer_fd_, flags, &new_timeout, &old_timeout);
+    return;
+  }
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+  interrupt();
+}
+
+int epoll_reactor::get_timeout()
+{
+  // By default we will wait no longer than 5 minutes. This will ensure that
+  // any changes to the system clock are detected after no longer than this.
+  return timer_queues_.wait_duration_msec(5 * 60 * 1000);
+}
+
+#if defined(BOOST_ASIO_HAS_TIMERFD)
+int epoll_reactor::get_timeout(itimerspec& ts)
+{
+  ts.it_interval.tv_sec = 0;
+  ts.it_interval.tv_nsec = 0;
+
+  long usec = timer_queues_.wait_duration_usec(5 * 60 * 1000 * 1000);
+  ts.it_value.tv_sec = usec / 1000000;
+  ts.it_value.tv_nsec = usec ? (usec % 1000000) * 1000 : 1;
+
+  return usec ? 0 : TFD_TIMER_ABSTIME;
+}
+#endif // defined(BOOST_ASIO_HAS_TIMERFD)
+
+struct epoll_reactor::perform_io_cleanup_on_block_exit
+{
+  explicit perform_io_cleanup_on_block_exit(epoll_reactor* r)
+    : reactor_(r), first_op_(0)
+  {
+  }
+
+  ~perform_io_cleanup_on_block_exit()
+  {
+    if (first_op_)
+    {
+      // Post the remaining completed operations for invocation.
+      if (!ops_.empty())
+        reactor_->io_service_.post_deferred_completions(ops_);
+
+      // A user-initiated operation has completed, but there's no need to
+      // explicitly call work_finished() here. Instead, we'll take advantage of
+      // the fact that the task_io_service will call work_finished() once we
+      // return.
+    }
+    else
+    {
+      // No user-initiated operations have completed, so we need to compensate
+      // for the work_finished() call that the task_io_service will make once
+      // this operation returns.
+      reactor_->io_service_.work_started();
+    }
+  }
+
+  epoll_reactor* reactor_;
+  op_queue<operation> ops_;
+  operation* first_op_;
+};
+
+epoll_reactor::descriptor_state::descriptor_state()
+  : operation(&epoll_reactor::descriptor_state::do_complete)
+{
+}
+
+operation* epoll_reactor::descriptor_state::perform_io(uint32_t events)
+{
+  mutex_.lock();
+  perform_io_cleanup_on_block_exit io_cleanup(reactor_);
+  mutex::scoped_lock descriptor_lock(mutex_, mutex::scoped_lock::adopt_lock);
+
+  // Exception operations must be processed first to ensure that any
+  // out-of-band data is read before normal data.
+  static const int flag[max_ops] = { EPOLLIN, EPOLLOUT, EPOLLPRI };
+  for (int j = max_ops - 1; j >= 0; --j)
+  {
+    if (events & (flag[j] | EPOLLERR | EPOLLHUP))
+    {
+      while (reactor_op* op = op_queue_[j].front())
+      {
+        if (op->perform())
+        {
+          op_queue_[j].pop();
+          io_cleanup.ops_.push(op);
+        }
+        else
+          break;
+      }
+    }
+  }
+
+  // The first operation will be returned for completion now. The others will
+  // be posted for later by the io_cleanup object's destructor.
+  io_cleanup.first_op_ = io_cleanup.ops_.front();
+  io_cleanup.ops_.pop();
+  return io_cleanup.first_op_;
+}
+
+void epoll_reactor::descriptor_state::do_complete(
+    io_service_impl* owner, operation* base,
+    const boost::system::error_code& ec, std::size_t bytes_transferred)
+{
+  if (owner)
+  {
+    descriptor_state* descriptor_data = static_cast<descriptor_state*>(base);
+    uint32_t events = static_cast<uint32_t>(bytes_transferred);
+    if (operation* op = descriptor_data->perform_io(events))
+    {
+      op->complete(*owner, ec, 0);
+    }
+  }
+}
+
+} // namespace detail
+} // namespace asio
+} // namespace boost
+
+#include <boost/asio/detail/pop_options.hpp>
+
+#endif // defined(BOOST_ASIO_HAS_EPOLL)
+
+#endif // BOOST_ASIO_DETAIL_IMPL_EPOLL_REACTOR_IPP

samples/Component Pascal/Example.cp

@@ -0,0 +1,130 @@
+MODULE ObxControls;
+(**
+    project         = "BlackBox"
+    organization    = "www.oberon.ch"
+    contributors    = "Oberon microsystems"
+    version         = "System/Rsrc/About"
+    copyright       = "System/Rsrc/About"
+    license         = "Docu/BB-License"
+    changes         = ""
+    issues          = ""
+
+**)
+
+IMPORT Dialog, Ports, Properties, Views;
+
+CONST beginner = 0; advanced = 1; expert = 2; guru = 3;    (* user classes *)
+
+TYPE
+    View = POINTER TO RECORD (Views.View)
+        size: INTEGER    (* border size in mm *)
+    END;
+
+VAR
+    data*: RECORD
+        class*: INTEGER;    (* current user class *)
+        list*: Dialog.List;    (* list of currently available sizes, derived from class *)
+        width*: INTEGER    (* width of next view to be opened. Derived from
+                                    class, or entered through a text entry field *)
+    END;
+
+    predef: ARRAY 6 OF INTEGER;    (* table of predefined sizes *)
+
+
+PROCEDURE SetList;
+BEGIN
+    IF data.class = beginner THEN
+        data.list.SetLen(1);
+        data.list.SetItem(0, "default")
+    ELSIF data.class = advanced THEN
+        data.list.SetLen(4);
+        data.list.SetItem(0, "default");
+        data.list.SetItem(1, "small");
+        data.list.SetItem(2, "medium");
+        data.list.SetItem(3, "large");
+    ELSE
+        data.list.SetLen(6);
+        data.list.SetItem(0, "default");
+        data.list.SetItem(1, "small");
+        data.list.SetItem(2, "medium");
+        data.list.SetItem(3, "large");
+        data.list.SetItem(4, "tiny");
+        data.list.SetItem(5, "huge");
+    END
+END SetList;
+
+(* View *)
+
+PROCEDURE (v: View) CopyFromSimpleView (source: Views.View);
+BEGIN
+    v.size := source(View).size
+END CopyFromSimpleView;
+
+PROCEDURE (v: View) Restore (f: Views.Frame; l, t, r, b: INTEGER);
+BEGIN    (* fill view with a red square of size v.size *)
+    IF v.size = 0 THEN v.size := predef[0] END;    (* lazy initialization of size *)
+    f.DrawRect(0, 0, v.size, v.size, Ports.fill, Ports.red)
+END Restore;
+
+PROCEDURE (v: View) HandlePropMsg (VAR msg: Views.PropMessage);
+BEGIN
+    WITH msg: Properties.SizePref DO
+        IF v.size = 0 THEN v.size := predef[0] END;    (* lazy initialization of size *)
+        msg.w := v.size; msg.h := v.size    (* tell environment about desired width and height *)
+    ELSE    (* ignore other messages *)
+    END
+END HandlePropMsg;
+
+(* notifiers *)
+
+PROCEDURE ClassNotify* (op, from, to: INTEGER);
+BEGIN    (* react to change in data.class *)
+    IF op = Dialog.changed THEN
+        IF (to = beginner) OR (to = advanced) & (data.list.index > 3) THEN
+            (* if class is reduced, make sure that selection contains legal elements *)
+            data.list.index := 0; data.width := predef[0];    (* modify interactor *)
+            Dialog.Update(data)    (* redraw controls where necessary *)
+        END;
+        SetList;
+        Dialog.UpdateList(data.list)    (* reconstruct list box contents *)
+    END
+END ClassNotify;
+
+PROCEDURE ListNotify* (op, from, to: INTEGER);
+BEGIN    (* reacto to change in data.list (index to was selected) *)
+    IF op = Dialog.changed THEN
+        data.width := predef[to];    (* modify interactor *)
+        Dialog.Update(data)    (* redraw controls where necessary *)
+    END
+END ListNotify;
+
+(* guards *)
+
+PROCEDURE ListGuard* (VAR par: Dialog.Par);
+BEGIN    (* disable list box for a beginner *)
+    par.disabled := data.class = beginner
+END ListGuard;
+
+PROCEDURE WidthGuard* (VAR par: Dialog.Par);
+BEGIN    (* make text entry field read-only if user is not guru *)
+    par.readOnly := data.class # guru
+END WidthGuard;
+
+(* commands *)
+
+PROCEDURE Open*;
+    VAR v: View;
+BEGIN
+    NEW(v);    (* create and initialize a new view *)
+    v.size := data.width * Ports.mm;    (* define view's size in function of class *)
+    Views.OpenAux(v, "Example")    (* open the view in a window *)
+END Open;
+
+BEGIN    (* initialization of global variables *)
+    predef[0] := 40; predef[1] := 30; predef[2] := 50;    (* predefined sizes *)
+    predef[3] := 70; predef[4] := 20; predef[5] := 100;
+    data.class := beginner;    (* default values *)
+    data.list.index := 0;
+    data.width := predef[0];
+    SetList
+END ObxControls.

samples/Component Pascal/Example2.cps

@@ -0,0 +1,71 @@
+MODULE ObxFact;
+(**
+    project         = "BlackBox"
+    organization    = "www.oberon.ch"
+    contributors    = "Oberon microsystems"
+    version         = "System/Rsrc/About"
+    copyright       = "System/Rsrc/About"
+    license         = "Docu/BB-License"
+    changes         = ""
+    issues          = ""
+
+**)
+
+IMPORT
+    Stores, Models, TextModels, TextControllers, Integers;
+
+PROCEDURE Read(r: TextModels.Reader; VAR x: Integers.Integer);
+    VAR i, len, beg: INTEGER; ch: CHAR; buf: POINTER TO ARRAY OF CHAR;
+BEGIN
+    r.ReadChar(ch);
+    WHILE ~r.eot & (ch <= " ") DO r.ReadChar(ch) END;
+    ASSERT(~r.eot & (((ch >= "0") & (ch <= "9")) OR (ch = "-")));
+    beg := r.Pos() - 1; len := 0;
+    REPEAT INC(len); r.ReadChar(ch) UNTIL r.eot OR (ch < "0") OR (ch > "9");
+    NEW(buf, len + 1);
+    i := 0; r.SetPos(beg);
+    REPEAT r.ReadChar(buf[i]); INC(i) UNTIL i = len;
+    buf[i] := 0X;
+    Integers.ConvertFromString(buf^, x)
+END Read;
+
+PROCEDURE Write(w: TextModels.Writer; x: Integers.Integer);
+    VAR i: INTEGER;
+BEGIN
+    IF Integers.Sign(x) < 0 THEN w.WriteChar("-") END;
+    i := Integers.Digits10Of(x);
+    IF i # 0 THEN
+        REPEAT DEC(i); w.WriteChar(Integers.ThisDigit10(x, i)) UNTIL i = 0
+    ELSE w.WriteChar("0")
+    END
+END Write;
+
+PROCEDURE Compute*;
+    VAR beg, end, i, n: INTEGER; ch: CHAR;
+        s: Stores.Operation;
+        r: TextModels.Reader; w: TextModels.Writer; attr: TextModels.Attributes;
+        c: TextControllers.Controller;
+        x: Integers.Integer;
+BEGIN
+    c := TextControllers.Focus();
+    IF (c # NIL) & c.HasSelection() THEN
+        c.GetSelection(beg, end);
+        r := c.text.NewReader(NIL); r.SetPos(beg); r.ReadChar(ch);
+        WHILE ~r.eot & (beg < end) & (ch <= " ") DO r.ReadChar(ch); INC(beg) END;
+        IF ~r.eot & (beg < end) THEN
+            r.ReadPrev; Read(r, x);
+            end := r.Pos(); r.ReadPrev; attr :=r.attr;
+            IF (Integers.Sign(x) > 0) & (Integers.Compare(x, Integers.Long(MAX(LONGINT))) <= 0) THEN
+                n := SHORT(Integers.Short(x)); i := 2; x := Integers.Long(1);
+                WHILE i <= n DO x := Integers.Product(x, Integers.Long(i)); INC(i) END;
+                Models.BeginScript(c.text, "computation", s);
+                c.text.Delete(beg, end);
+                w := c.text.NewWriter(NIL); w.SetPos(beg); w.SetAttr(attr);
+                Write(w, x);
+                Models.EndScript(c.text, s)
+            END
+        END
+    END
+END Compute;
+
+END ObxFact.

samples/GAMS/transport.gms

@@ -0,0 +1,76 @@
+*Basic example of transport model from GAMS model library
+
+$Title  A Transportation Problem (TRNSPORT,SEQ=1)
+$Ontext
+
+This problem finds a least cost shipping schedule that meets
+requirements at markets and supplies at factories.
+
+
+Dantzig, G B, Chapter 3.3. In Linear Programming and Extensions.
+Princeton University Press, Princeton, New Jersey, 1963.
+
+This formulation is described in detail in:
+Rosenthal, R E, Chapter 2: A GAMS Tutorial. In GAMS: A User's Guide.
+The Scientific Press, Redwood City, California, 1988.
+
+The line numbers will not match those in the book because of these
+comments.
+
+$Offtext
+
+
+  Sets
+       i   canning plants   / seattle, san-diego /
+       j   markets          / new-york, chicago, topeka / ;
+  Parameters
+       a(i)  capacity of plant i in cases
+         /    seattle     350
+              san-diego   600  /
+       b(j)  demand at market j in cases
+         /    new-york    325
+              chicago     300
+              topeka      275  / ;
+  Table d(i,j)  distance in thousands of miles
+                    new-york       chicago      topeka
+      seattle          2.5           1.7          1.8
+      san-diego        2.5           1.8          1.4  ;
+  Scalar f  freight in dollars per case per thousand miles  /90/ ;
+  Parameter c(i,j)  transport cost in thousands of dollars per case ;
+            c(i,j) = f * d(i,j) / 1000 ;
+  Variables
+       x(i,j)  shipment quantities in cases
+       z       total transportation costs in thousands of dollars ;
+
+  Positive Variable x ;
+
+  Equations
+       cost        define objective function
+       supply(i)   observe supply limit at plant i
+       demand(j)   satisfy demand at market j ;
+
+  cost ..        z  =e=  sum((i,j), c(i,j)*x(i,j)) ;
+
+  supply(i) ..   sum(j, x(i,j))  =l=  a(i) ;
+
+  demand(j) ..   sum(i, x(i,j))  =g=  b(j) ;
+
+  Model transport /all/ ;
+
+  Solve transport using lp minimizing z ;
+
+  Display x.l, x.m ;
+
+$ontext
+#user model library stuff
+Main topic Basic GAMS
+Featured item 1 Trnsport model
+Featured item 2
+Featured item 3
+Featured item 4
+Description
+Basic example of transport model from GAMS model library
+
+
+
+$offtext

samples/GLSL/SimpleLighting.gl2.frag

@@ -0,0 +1,9 @@
+static const char* SimpleFragmentShader = STRINGIFY(
+
+varying vec4 FrontColor;
+
+void main(void)
+{
+    gl_FragColor = FrontColor;
+}
+);

samples/GLSL/recurse1.frag

@@ -0,0 +1,48 @@
+#version 330 core
+
+// cross-unit recursion
+
+void main() {}
+
+// two-level recursion
+
+float cbar(int);
+
+void cfoo(float)
+{
+	cbar(2);
+}
+
+// four-level, out of order
+
+void CB();
+void CD();
+void CA() { CB(); }
+void CC() { CD(); }
+
+// high degree
+
+void CBT();
+void CDT();
+void CAT() { CBT(); CBT(); CBT(); }
+void CCT() { CDT(); CDT(); CBT(); }
+
+// not recursive
+
+void norA() {}
+void norB() { norA(); }
+void norC() { norA(); }
+void norD() { norA(); }
+void norE() { norB(); }
+void norF() { norB(); }
+void norG() { norE(); }
+void norH() { norE(); }
+void norI() { norE(); }
+
+// not recursive, but with a call leading into a cycle if ignoring direction
+
+void norcA() { }
+void norcB() { norcA(); }
+void norcC() { norcB(); }
+void norcD() { norcC(); norcB(); } // head of cycle
+void norcE() { norcD(); } // lead into cycle

samples/Groovy/script.gvy

@@ -0,0 +1,2 @@
+#!/usr/bin/env groovy
+println "Hello World"

samples/Groovy/template.grt

@@ -0,0 +1,9 @@
+html {
+  head {
+    component "bootstrap"
+    title "Bootstrap Template"
+  }
+  
+  html {
+  }
+}

samples/Groovy/template.gtpl

@@ -0,0 +1,9 @@
+html {
+  head {
+    title "Example Template"
+  }
+  
+  body {
+    p "This is a quick template example"
+  }
+}

samples/JavaScript/intro.js.frag

@@ -0,0 +1,7 @@
+(function(window, angular) {
+
+Array.prototype.last = function() {
+    return this[this.length-1];
+};
+
+var app = angular.module('ConwayGameOfLife', []);

samples/JavaScript/outro.js.frag

@@ -0,0 +1,3 @@
+
+})(window, window.angular);
+

samples/Ox/IJCEmet2009.oxh

@@ -0,0 +1,72 @@
+/** Replicate Imai, Jain and Ching Econometrica 2009 (incomplete).
+
+**/
+#include "IJCEmet2009.h"
+
+Kapital::Kapital(L,const N,const entrant,const exit,const KP){
+	StateVariable(L,N);
+	this.entrant = entrant;
+	this.exit = exit;
+	this.KP = KP;
+	actual = Kbar*vals/(N-1);
+	upper = log(actual~.Inf);
+	}
+
+Kapital::Transit(FeasA) {
+	decl ent =CV(entrant), stayout = FeasA[][exit.pos], tprob, sigu = CV(KP[SigU]);
+	if (!v && !ent) return { <0>, ones(stayout) };
+	tprob = ent ? probn( (upper-CV(KP[Kbe]))/sigu )
+	           : probn( (upper-(CV(KP[Kb0])+CV(KP[Kb2])*upper[v])) / sigu );
+	tprob = tprob[1:] - tprob[:N-1];
+	return { vals, tprob.*(1-stayout)+(1.0~zeros(1,N-1)).*stayout };
+	}
+
+FirmEntry::Run() {
+	Initialize();
+	GenerateSample();
+	BDP->BayesianDP();
+	}
+
+FirmEntry::Initialize() {
+	Rust::Initialize(Reachable,0);
+	sige = new StDeviations("sige",<0.3,0.3>,0);
+	entrant = new LaggedAction("entrant",d);
+	KP = new array[Kparams];
+		KP[Kbe] = new Positive("be",0.5);
+		KP[Kb0] = new Free("b0",0.0);
+		KP[Kb1] = new Determined("b1",0.0);
+		KP[Kb2] = new Positive("b2",0.4);
+		KP[SigU] = new Positive("sigu",0.4);
+	EndogenousStates(K = new Kapital("K",KN,entrant,d,KP),entrant);
+	SetDelta(new Probability("delta",0.85));
+	kcoef = new Positive("kcoef",0.1);
+	ecost = new Negative("ec",-0.4);
+	CreateSpaces();
+	}
+
+FirmEntry::GenerateSample() {
+	Volume = LOUD;
+	EM = new ValueIteration(0);
+//	EM -> Solve(0,0);
+	data = new DataSet(0,EM);
+	data->Simulate(DataN,DataT,0,FALSE);
+	data->Print("firmentry.xls");
+	BDP = new ImaiJainChing("FMH",data,EM,ecost,sige,kcoef,KP,delta);
+	}
+
+/** Capital stock can be positive only for incumbents.
+**/
+FirmEntry::Reachable()	{ return CV(entrant)*CV(K) ? 0 : new FirmEntry() ;	}
+
+/** The one period return.
+<DD>
+<pre>U = </pre>
+</DD>
+**/
+FirmEntry::Utility()  {
+	decl ent = CV(entrant),
+		 u =
+		     ent*CV(ecost)+(1-ent)*CV(kcoef)*AV(K)
+		   | 0.0;
+	return u;
+	}

samples/Ox/ParallelObjective.ox

@@ -0,0 +1,63 @@
+/** Client and Server classes for parallel optimization using CFMPI.**/
+#include "ParallelObjective.h"
+
+/** Set up MPI Client-Server support for objective optimization.
+@param obj `Objective' to parallelize
+@param DONOTUSECLIENT TRUE (default): client node does no object evaluation<br>FALSE after putting servers to work Client node does one evaluation.
+**/
+ParallelObjective(obj,DONOTUSECLIENT) {
+	if (isclass(obj.p2p)) {oxwarning("P2P object already exists for "+obj.L+". Nothing changed"); return;}
+	obj.p2p = new P2P(DONOTUSECLIENT,new ObjClient(obj),new ObjServer(obj));
+	}
+
+ObjClient::ObjClient(obj) { this.obj = obj;    }
+
+ObjClient::Execute() {    }
+
+ObjServer::ObjServer(obj) {
+    this.obj = obj;
+    basetag = P2P::STOP_TAG+1;
+    iml = obj.NvfuncTerms;
+    Nparams = obj.nstruct;
+    }
+
+/** Wait on the objective client.
+**/
+ObjServer::Loop(nxtmsgsz) {
+    Nparams = nxtmsgsz;   //free param length is no greater than Nparams
+    if (Volume>QUIET) println("ObjServer server ",ID," Nparams ",Nparams);
+    Server::Loop(Nparams);
+    Recv(ANY_TAG);                      //receive the ending parameter vector
+    obj->Encode(Buffer[:Nparams-1]);   //encode it.
+    }
+
+/** Do the objective evaluation.
+Receive structural parameter vector and `Objective::Encode`() it.
+Call `Objective::vfunc`().
+@return Nparams (max. length of next expected message);
+**/
+ObjServer::Execute() {
+	obj->Decode(Buffer[:obj.nfree-1]);
+	Buffer = obj.cur.V[] = obj->vfunc();
+    if (Volume>QUIET) println("Server Executive: ",ID," vfunc[0]= ",Buffer[0]);
+	return obj.nstruct;
+	}
+
+CstrServer::CstrServer(obj) { ObjServer(obj);	}
+
+SepServer::SepServer(obj) { ObjServer(obj);	}
+
+CstrServer::Execute() {
+	obj->Encode(Buffer);
+	obj->Lagrangian(0);
+	return rows(Buffer = obj.cur->Vec());
+	}
+
+/** Separable objective evaluations.
+**/
+SepServer::Execute() {
+	obj.Kvar.v = imod(Tag-basetag,obj.K);
+	obj->Encode(Buffer,TRUE);
+	Buffer = obj.Kvar->PDF() * obj->vfunc();
+	return obj.NvfuncTerms;
+	}

samples/Ox/particle.oxo

@@ -0,0 +1,38 @@
+nldge::ParticleLogLikeli()
+{	decl it, ip,
+		 mss, mbas, ms, my, mx, vw, vwi, dws,
+		 mhi, mhdet, loglikeli, mData,
+		 vxm, vxs, mxm=<>, mxsu=<>, mxsl=<>,
+		 time, timeall, timeran=0, timelik=0, timefun=0, timeint=0, timeres=0;
+
+	mData = GetData(m_asY);
+	mhdet = sqrt((2*M_PI)^m_cY * determinant(m_mMSbE.^2));		// covariance determinant
+	mhi   = invert(m_mMSbE.^2);					// invert covariance of measurement shocks
+
+	ms 	  = m_vSss + zeros(m_cPar, m_cS);			// start particles
+	mx 	  = m_vXss + zeros(m_cPar, m_cX);			// steady state of state and policy
+
+	loglikeli = 0;							// init likelihood
+																								//timeall=timer();
+	for(it = 0; it < sizer(mData); it++)
+	{
+		mss = rann(m_cPar, m_cSS) * m_mSSbE;			// state noise
+		fg(&ms, ms, mx, mss);					// transition prior as proposal
+		mx = m_oApprox.FastInterpolate(ms); 			// interpolate
+		fy(&my, ms, mx, zeros(m_cPar, m_cMS));			// evaluate importance weights
+		my -= mData[it][];					// observation error
+
+		vw = exp(-0.5 * outer(my,mhi,'d')' )/mhdet;		// vw = exp(-0.5 * sumr(my*mhi .*my ) )/mhdet;
+
+		vw = vw .== .NaN .? 0 .: vw;				// no policy can happen for extrem particles
+		dws = sumc(vw);
+		if(dws==0) return -.Inf;				// or extremely wrong parameters
+		loglikeli += log(dws/m_cPar)	;			// loglikelihood contribution
+																										//timelik += (timer()-time)/100;
+																										//time=timer();
+		vwi = resample(vw/dws)-1;				// selection step in c++
+		ms = ms[vwi][];						// on normalized weights
+		mx = mx[vwi][];
+																	}
+	return loglikeli;
+}

samples/Pan/test.pan

@@ -0,0 +1,54 @@
+object template pantest;
+
+# Very simple pan test file
+"/long/decimal" = 123;
+"/long/octal" = 0755;
+"/long/hexadecimal" = 0xFF;
+
+"/double/simple" = 0.01;
+"/double/pi" = 3.14159;
+"/double/exponent" = 1e-8;
+"/double/scientific" = 1.3E10;
+
+"/string/single" = 'Faster, but escapes like \t, \n and \x3d don''t work, but '' should work.';
+"/string/double" = "Slower, but escapes like \t, \n and \x3d do work";
+
+variable TEST = 2;
+
+"/x2" = to_string(TEST);
+"/x2" ?= 'Default value';
+
+"/x3" = 1 + 2 + value("/long/decimal");
+
+"/x4" = undef;
+
+"/x5" = null;
+
+variable e ?= error("Test error message");
+
+# include gmond config for services-monitoring
+include { 'site/ganglia/gmond/services-monitoring' };
+
+"/software/packages"=pkg_repl("httpd","2.2.3-43.sl5.3",PKG_ARCH_DEFAULT);
+"/software/packages"=pkg_repl("php");
+
+# Example function
+function show_things_view_for_stuff = {
+    thing = ARGV[0];
+    foreach( i; mything; STUFF ) {
+        if ( thing == mything ) {
+            return( true );
+        } else {
+            return SELF;
+        };
+    };
+    false;
+};
+
+variable HERE = <<EOF;
+; This example demonstrates an in-line heredoc style config file
+[main]
+awesome = true
+EOF
+
+variable small = false;#This should be highlighted normally again.

samples/R/scholar.Rd

@@ -0,0 +1,25 @@
+\docType{package}
+\name{scholar}
+\alias{scholar}
+\alias{scholar-package}
+\title{scholar}
+\source{
+  The package reads data from
+  \url{http://scholar.google.com}.  Dates and citation
+  counts are estimated and are determined automatically by
+  a computer program. Use at your own risk.
+}
+\description{
+  The \code{scholar} package provides functions to extract
+  citation data from Google Scholar.  There are also
+  convenience functions for comparing multiple scholars and
+  predicting h-index scores based on past publication
+  records.
+}
+\note{
+  A complementary set of Google Scholar functions can be
+  found at
+  \url{http://biostat.jhsph.edu/~jleek/code/googleCite.r}.
+  The \code{scholar} package was developed independently.
+}
+

samples/SAS/data.sas

@@ -0,0 +1,17 @@
+/* Example DATA step code for linguist */
+
+libname source 'C:\path\to\file'
+
+data work.working_copy;
+	set source.original_file.sas7bdat;
+run;
+
+data work.working_copy;
+	set work.working_copy;
+	if Purge = 1 then delete;
+run;
+
+data work.working_copy;
+	set work.working_copy;
+	if ImportantVariable = . then MissingFlag = 1;
+run;

samples/SAS/proc.sas

@@ -0,0 +1,15 @@
+/* PROC examples for Linguist */
+
+proc surveyselect data=work.data out=work.boot method=urs reps=20000 seed=2156 sampsize=28 outhits;
+	samplingunit Site;	
+run;
+
+PROC MI data=work.boot out=work.bootmi nimpute=30 seed=5686 round = 1;
+	By Replicate;
+	VAR Variable1 Variable2;
+run;
+
+proc logistic data=work.bootmi descending;
+	By Replicate _Imputation_;
+	model Outcome = Variable1 Variable2 / risklimits;
+run;

samples/Standard ML/Foo.ML

@@ -0,0 +1,75 @@
+
+structure LazyBase:> LAZY_BASE =
+   struct
+      type 'a lazy = unit -> 'a
+
+      exception Undefined
+
+      fun delay f = f
+
+      fun force f = f()
+
+      val undefined = fn () => raise Undefined
+   end
+
+structure LazyMemoBase:> LAZY_BASE =
+   struct 
+
+      datatype 'a susp = NotYet of unit -> 'a
+                       | Done of 'a
+
+      type 'a lazy = unit -> 'a susp ref
+
+      exception Undefined
+
+      fun delay f = 
+          let 
+             val r = ref (NotYet f)
+          in
+             fn () => r
+          end
+
+      fun force f = 
+          case f() of
+             ref (Done x) => x
+           | r as ref (NotYet f') =>
+             let
+                val a = f'()
+             in
+                r := Done a
+              ; a
+             end
+
+      val undefined = fn () => raise Undefined
+   end
+
+functor LazyFn(B: LAZY_BASE): LAZY' =
+   struct
+
+      open B
+
+      fun inject x = delay (fn () => x)
+
+      fun isUndefined x =
+          (ignore (force x)
+         ; false)
+          handle Undefined => true
+                              
+      fun toString f x = if isUndefined x then "_|_" else f (force x)
+
+      fun eqBy p (x,y) = p(force x,force y)
+      fun eq (x,y) = eqBy op= (x,y)
+      fun compare p (x,y) = p(force x,force y)
+
+      structure Ops = 
+         struct 
+            val ! = force
+            val ? = inject
+         end
+
+      fun map f x = delay (fn () => f (force x))
+
+   end
+
+structure Lazy' = LazyFn(LazyBase)
+structure LazyMemo = LazyFn(LazyMemoBase)

samples/Swift/section-11.swift

@@ -0,0 +1,4 @@
+let apples = 3
+let oranges = 5
+let appleSummary = "I have \(apples) apples."
+let fruitSummary = "I have \(apples + oranges) pieces of fruit."

samples/Swift/section-13.swift

@@ -0,0 +1,8 @@
+var shoppingList = ["catfish", "water", "tulips", "blue paint"]
+shoppingList[1] = "bottle of water"
+
+var occupations = [
+    "Malcolm": "Captain",
+    "Kaylee": "Mechanic",
+ ]
+occupations["Jayne"] = "Public Relations"

samples/Swift/section-15.swift

@@ -0,0 +1,2 @@
+let emptyArray = String[]()
+let emptyDictionary = Dictionary<String, Float>()

samples/Swift/section-17.swift

@@ -0,0 +1 @@
+shoppingList = []   // Went shopping and bought everything.

samples/Swift/section-19.swift

@@ -0,0 +1,10 @@
+let individualScores = [75, 43, 103, 87, 12]
+var teamScore = 0
+for score in individualScores {
+    if score > 50 {
+        teamScore += 3
+    } else {
+        teamScore += 1
+    }
+}
+teamScore

samples/Swift/section-21.swift

@@ -0,0 +1,8 @@
+var optionalString: String? = "Hello"
+optionalString == nil
+
+var optionalName: String? = "John Appleseed"
+var greeting = "Hello!"
+if let name = optionalName {
+    greeting = "Hello, \(name)"
+}

samples/Swift/section-23.swift

@@ -0,0 +1,11 @@
+let vegetable = "red pepper"
+switch vegetable {
+    case "celery":
+        let vegetableComment = "Add some raisins and make ants on a log."
+    case "cucumber", "watercress":
+        let vegetableComment = "That would make a good tea sandwich."
+    case let x where x.hasSuffix("pepper"):
+        let vegetableComment = "Is it a spicy \(x)?"
+    default:
+        let vegetableComment = "Everything tastes good in soup."
+}

samples/Swift/section-25.swift

@@ -0,0 +1,14 @@
+let interestingNumbers = [
+    "Prime": [2, 3, 5, 7, 11, 13],
+    "Fibonacci": [1, 1, 2, 3, 5, 8],
+    "Square": [1, 4, 9, 16, 25],
+]
+var largest = 0
+for (kind, numbers) in interestingNumbers {
+    for number in numbers {
+        if number > largest {
+            largest = number
+        }
+    }
+}
+largest

samples/Swift/section-27.swift

@@ -0,0 +1,11 @@
+var n = 2
+while n < 100 {
+    n = n * 2
+}
+n
+
+var m = 2
+do {
+    m = m * 2
+} while m < 100
+m

samples/Swift/section-29.swift

@@ -0,0 +1,11 @@
+var firstForLoop = 0
+for i in 0..3 {
+    firstForLoop += i
+}
+firstForLoop
+
+var secondForLoop = 0
+for var i = 0; i < 3; ++i {
+    secondForLoop += 1
+}
+secondForLoop

samples/Swift/section-3.swift

@@ -0,0 +1 @@
+println("Hello, world")

samples/Swift/section-31.swift

@@ -0,0 +1,4 @@
+func greet(name: String, day: String) -> String {
+    return "Hello \(name), today is \(day)."
+}
+greet("Bob", "Tuesday")

samples/Swift/section-33.swift

@@ -0,0 +1,4 @@
+func getGasPrices() -> (Double, Double, Double) {
+    return (3.59, 3.69, 3.79)
+}
+getGasPrices()

samples/Swift/section-35.swift

@@ -0,0 +1,9 @@
+func sumOf(numbers: Int...) -> Int {
+    var sum = 0
+    for number in numbers {
+        sum += number
+    }
+    return sum
+}
+sumOf()
+sumOf(42, 597, 12)

samples/Swift/section-37.swift

@@ -0,0 +1,9 @@
+func returnFifteen() -> Int {
+    var y = 10
+    func add() {
+        y += 5
+    }
+    add()
+    return y
+}
+returnFifteen()

samples/Swift/section-39.swift

@@ -0,0 +1,8 @@
+func makeIncrementer() -> (Int -> Int) {
+    func addOne(number: Int) -> Int {
+        return 1 + number
+    }
+    return addOne
+}
+var increment = makeIncrementer()
+increment(7)

samples/Swift/section-41.swift

@@ -0,0 +1,13 @@
+func hasAnyMatches(list: Int[], condition: Int -> Bool) -> Bool {
+    for item in list {
+        if condition(item) {
+            return true
+        }
+    }
+    return false
+}
+func lessThanTen(number: Int) -> Bool {
+    return number < 10
+}
+var numbers = [20, 19, 7, 12]
+hasAnyMatches(numbers, lessThanTen)

samples/Swift/section-43.swift

@@ -0,0 +1,5 @@
+numbers.map({
+    (number: Int) -> Int in
+    let result = 3 * number
+    return result
+})

samples/Swift/section-45.swift

@@ -0,0 +1 @@
+numbers.map({ number in 3 * number })

samples/Swift/section-47.swift

@@ -0,0 +1 @@
+sort([1, 5, 3, 12, 2]) { $0 > $1 }

samples/Swift/section-49.swift

@@ -0,0 +1,6 @@
+class Shape {
+    var numberOfSides = 0
+    func simpleDescription() -> String {
+        return "A shape with \(numberOfSides) sides."
+    }
+}

samples/Swift/section-5.swift

@@ -0,0 +1,3 @@
+var myVariable = 42
+myVariable = 50
+let myConstant = 42

samples/Swift/section-51.swift

@@ -0,0 +1,3 @@
+var shape = Shape()
+shape.numberOfSides = 7
+var shapeDescription = shape.simpleDescription()

samples/Swift/section-53.swift

@@ -0,0 +1,12 @@
+class NamedShape {
+    var numberOfSides: Int = 0
+    var name: String
+
+    init(name: String) {
+       self.name = name
+    }
+
+    func simpleDescription() -> String {
+       return "A shape with \(numberOfSides) sides."
+    }
+}

samples/Swift/section-55.swift

@@ -0,0 +1,20 @@
+class Square: NamedShape {
+    var sideLength: Double
+
+    init(sideLength: Double, name: String) {
+        self.sideLength = sideLength
+        super.init(name: name)
+        numberOfSides = 4
+    }
+
+    func area() ->  Double {
+        return sideLength * sideLength
+    }
+
+    override func simpleDescription() -> String {
+        return "A square with sides of length \(sideLength)."
+    }
+}
+let test = Square(sideLength: 5.2, name: "my test square")
+test.area()
+test.simpleDescription()

samples/Swift/section-57.swift

@@ -0,0 +1,26 @@
+class EquilateralTriangle: NamedShape {
+    var sideLength: Double = 0.0
+
+    init(sideLength: Double, name: String) {
+        self.sideLength = sideLength
+        super.init(name: name)
+        numberOfSides = 3
+    }
+
+    var perimeter: Double {
+        get {
+             return 3.0 * sideLength
+        }
+        set {
+            sideLength = newValue / 3.0
+        }
+    }
+
+    override func simpleDescription() -> String {
+        return "An equilateral triagle with sides of length \(sideLength)."
+    }
+}
+var triangle = EquilateralTriangle(sideLength: 3.1, name: "a triangle")
+triangle.perimeter
+triangle.perimeter = 9.9
+triangle.sideLength

samples/Swift/section-59.swift

@@ -0,0 +1,21 @@
+class TriangleAndSquare {
+    var triangle: EquilateralTriangle {
+        willSet {
+            square.sideLength = newValue.sideLength
+        }
+    }
+    var square: Square {
+        willSet {
+            triangle.sideLength = newValue.sideLength
+        }
+    }
+    init(size: Double, name: String) {
+        square = Square(sideLength: size, name: name)
+        triangle = EquilateralTriangle(sideLength: size, name: name)
+    }
+}
+var triangleAndSquare = TriangleAndSquare(size: 10, name: "another test shape")
+triangleAndSquare.square.sideLength
+triangleAndSquare.triangle.sideLength
+triangleAndSquare.square = Square(sideLength: 50, name: "larger square")
+triangleAndSquare.triangle.sideLength

samples/Swift/section-61.swift

@@ -0,0 +1,8 @@
+class Counter {
+    var count: Int = 0
+    func incrementBy(amount: Int, numberOfTimes times: Int) {
+        count += amount * times
+    }
+}
+var counter = Counter()
+counter.incrementBy(2, numberOfTimes: 7)

samples/Swift/section-63.swift

@@ -0,0 +1,2 @@
+let optionalSquare: Square? = Square(sideLength: 2.5, name: "optional square")
+let sideLength = optionalSquare?.sideLength

samples/Swift/section-65.swift

@@ -0,0 +1,21 @@
+enum Rank: Int {
+    case Ace = 1
+    case Two, Three, Four, Five, Six, Seven, Eight, Nine, Ten
+    case Jack, Queen, King
+    func simpleDescription() -> String {
+        switch self {
+            case .Ace:
+                return "ace"
+            case .Jack:
+                return "jack"
+            case .Queen:
+                return "queen"
+            case .King:
+                return "king"
+            default:
+                return String(self.toRaw())
+        }
+    }
+}
+let ace = Rank.Ace
+let aceRawValue = ace.toRaw()

samples/Swift/section-67.swift

@@ -0,0 +1,3 @@
+if let convertedRank = Rank.fromRaw(3) {
+    let threeDescription = convertedRank.simpleDescription()
+}

samples/Swift/section-69.swift

@@ -0,0 +1,17 @@
+enum Suit {
+    case Spades, Hearts, Diamonds, Clubs
+    func simpleDescription() -> String {
+        switch self {
+            case .Spades:
+                return "spades"
+            case .Hearts:
+                return "hearts"
+            case .Diamonds:
+                return "diamonds"
+            case .Clubs:
+                return "clubs"
+        }
+    }
+}
+let hearts = Suit.Hearts
+let heartsDescription = hearts.simpleDescription()

samples/Swift/section-7.swift

@@ -0,0 +1,3 @@
+let implicitInteger = 70
+let implicitDouble = 70.0
+let explicitDouble: Double = 70

samples/Swift/section-71.swift

@@ -0,0 +1,9 @@
+struct Card {
+    var rank: Rank
+    var suit: Suit
+    func simpleDescription() -> String {
+        return "The \(rank.simpleDescription()) of \(suit.simpleDescription())"
+    }
+}
+let threeOfSpades = Card(rank: .Three, suit: .Spades)
+let threeOfSpadesDescription = threeOfSpades.simpleDescription()

samples/Swift/section-73.swift

@@ -0,0 +1,14 @@
+enum ServerResponse {
+    case Result(String, String)
+    case Error(String)
+}
+
+let success = ServerResponse.Result("6:00 am", "8:09 pm")
+let failure = ServerResponse.Error("Out of cheese.")
+
+switch success {
+    case let .Result(sunrise, sunset):
+        let serverResponse = "Sunrise is at \(sunrise) and sunset is at \(sunset)."
+    case let .Error(error):
+        let serverResponse = "Failure...  \(error)"
+}

samples/Swift/section-75.swift

@@ -0,0 +1,4 @@
+protocol ExampleProtocol {
+     var simpleDescription: String { get }
+     mutating func adjust()
+}

samples/Swift/section-77.swift

@@ -0,0 +1,20 @@
+class SimpleClass: ExampleProtocol {
+     var simpleDescription: String = "A very simple class."
+     var anotherProperty: Int = 69105
+     func adjust() {
+          simpleDescription += "  Now 100% adjusted."
+     }
+}
+var a = SimpleClass()
+a.adjust()
+let aDescription = a.simpleDescription
+
+struct SimpleStructure: ExampleProtocol {
+     var simpleDescription: String = "A simple structure"
+     mutating func adjust() {
+          simpleDescription += " (adjusted)"
+     }
+}
+var b = SimpleStructure()
+b.adjust()
+let bDescription = b.simpleDescription

samples/Swift/section-79.swift

@@ -0,0 +1,9 @@
+extension Int: ExampleProtocol {
+    var simpleDescription: String {
+        return "The number \(self)"
+    }
+    mutating func adjust() {
+        self += 42
+    }
+ }
+7.simpleDescription

samples/Swift/section-81.swift

@@ -0,0 +1,3 @@
+let protocolValue: ExampleProtocol = a
+protocolValue.simpleDescription
+// protocolValue.anotherProperty  // Uncomment to see the error

samples/Swift/section-83.swift

@@ -0,0 +1,8 @@
+func repeat<ItemType>(item: ItemType, times: Int) -> ItemType[] {
+    var result = ItemType[]()
+    for i in 0..times {
+         result += item
+    }
+    return result
+}
+repeat("knock", 4)

samples/Swift/section-85.swift

@@ -0,0 +1,7 @@
+// Reimplement the Swift standard library's optional type
+enum OptionalValue<T> {
+    case None
+    case Some(T)
+}
+var possibleInteger: OptionalValue<Int> = .None
+possibleInteger = .Some(100)

samples/Swift/section-87.swift

@@ -0,0 +1,11 @@
+func anyCommonElements <T, U where T: Sequence, U: Sequence, T.GeneratorType.Element: Equatable, T.GeneratorType.Element == U.GeneratorType.Element> (lhs: T, rhs: U) -> Bool {
+    for lhsItem in lhs {
+        for rhsItem in rhs {
+            if lhsItem == rhsItem {
+                return true
+            }
+        }
+    }
+   return false
+}
+anyCommonElements([1, 2, 3], [3])

samples/Swift/section-9.swift

@@ -0,0 +1,3 @@
+let label = "The width is "
+let width = 94
+let widthLabel = label + String(width)

samples/Text/ISO-2022-KR.txt

@@ -0,0 +1,43 @@
+$)C#
+# Out-AnsiGraph.psm1
+# Author:       xcud
+# History:
+#       v0.1 September 21, 2009 initial version
+#
+# PS Example> ps | select -first 5 | sort -property VM | 
+#             Out-AnsiGraph ProcessName, VM
+#                 AEADISRV  14508032
+#                  audiodg  50757632
+#                  conhost  73740288
+# AppleMobileDeviceService  92061696
+#                    btdna  126443520
+#
+function Out-AnsiGraph($Parameter1=$null) {
+	BEGIN {
+		$q = new-object Collections.queue
+		$max = 0; $namewidth = 0;
+	}
+
+	PROCESS {
+		if($_) {
+			$name = $_.($Parameter1[0]);
+			$val = $_.($Parameter1[1])
+			if($max -lt $val) { $max = $val}		 
+			if($namewidth -lt $name.length) { 
+				$namewidth = $name.length }
+			$q.enqueue(@($name, $val))			
+		}
+	}
+
+	END {
+		$q | %{
+			$graph = ""; 0..($_[1]/$max*20) | 
+				%{ $graph += "" }
+			$name = "{0,$namewidth}" -f $_[0]
+			"$name $graph " + $_[1]
+		}
+
+	}
+}
+
+Export-ModuleMember Out-AnsiGraph

samples/Text/iso8859-8-i.txt

@@ -0,0 +1 @@
+%<25><><EFBFBD>

samples/Zimpl/sample.zmpl

@@ -0,0 +1,21 @@
+# $Id: queens3.zpl,v 1.3 2009/09/13 16:15:53 bzfkocht Exp $
+#
+# This is a formulation of the n queens problem using binary variables.
+# variables. Since the number of queens is maximized, the size of the
+# board can be set arbitrarily.
+#
+param columns := 8;
+
+set I   := { 1 .. columns };
+set IxI := I * I;
+
+set TABU[<i,j> in IxI] := { <m,n> in IxI with 
+   (m != i or n != j) and (m == i or n == j or abs(m - i) == abs(n - j)) };
+
+var x[IxI] binary;
+
+maximize queens: sum <i,j> in IxI : x[i,j];
+
+subto c1: forall <i,j> in IxI do
+   card(TABU[i,j]) - card(TABU[i,j]) * x[i,j] >= sum <m,n> in TABU[i,j] : x[m,n];
+   

test/test_blob.rb

@@ -97,14 +97,22 @@ class TestBlob < Test::Unit::TestCase
   def test_sloc
     assert_equal 2, blob("Ruby/foo.rb").sloc
     assert_equal 3, blob("Text/utf16le-windows.txt").sloc
+    assert_equal 1, blob("Text/iso8859-8-i.txt").sloc
   end
 
   def test_encoding
     assert_equal "ISO-8859-2", blob("Text/README").encoding
+    assert_equal "ISO-8859-2", blob("Text/README").ruby_encoding
     assert_equal "ISO-8859-1", blob("Text/dump.sql").encoding
+    assert_equal "ISO-8859-1", blob("Text/dump.sql").ruby_encoding
     assert_equal "UTF-8", blob("Text/foo.txt").encoding
+    assert_equal "UTF-8", blob("Text/foo.txt").ruby_encoding
     assert_equal "UTF-16LE", blob("Text/utf16le.txt").encoding
+    assert_equal "UTF-16LE", blob("Text/utf16le.txt").ruby_encoding
     assert_equal "UTF-16LE", blob("Text/utf16le-windows.txt").encoding
+    assert_equal "UTF-16LE", blob("Text/utf16le-windows.txt").ruby_encoding
+    assert_equal "ISO-2022-KR", blob("Text/ISO-2022-KR.txt").encoding
+    assert_equal "binary", blob("Text/ISO-2022-KR.txt").ruby_encoding
     assert_nil blob("Binary/dog.o").encoding
   end
 
@@ -363,6 +371,10 @@ class TestBlob < Test::Unit::TestCase
 
     # NuGet Packages
     assert blob("packages/Modernizr.2.0.6/Content/Scripts/modernizr-2.0.6-development-only.js").vendored?
+    
+    # Html5shiv
+    assert blob("Scripts/html5shiv.js").vendored?
+    assert blob("Scripts/html5shiv.min.js").vendored?
 
     # Test fixtures
     assert blob("test/fixtures/random.rkt").vendored?